{
  "_id": "6a4a1e270784416d7d8198d3",
  "Package": "tvcure",
  "Type": "Package",
  "Title": "Additive Cure Survival Model with Time-Varying Covariates",
  "Version": "0.6.6",
  "Authors@R": "person(\"Philippe\",\"Lambert\", \nemail=\"p.lambert@uliege.be\", role=c(\"aut\",\"cre\"),\ncomment=c(ORCID =\"0000-0002-3670-3328\"))",
  "Maintainer": "Philippe Lambert <p.lambert@uliege.be>",
  "BugReports": "https://github.com/plambertULiege/tvcure/issues",
  "Description": "Fit of a double additive cure survival model with\ntime-varying covariates. The additive terms in the long- and\nshort-term survival submodels, modelling the cure probability\nand the event timing for susceptible units, are estimated using\nLaplace P-splines. For more details, see Lambert and Kreyenfeld\n(2025) <doi:10.1093/jrsssa/qnaf035>.",
  "License": "GPL-3",
  "URL": "<https://github.com/plambertULiege/tvcure>",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.2",
  "Config/pak/sysreqs": "make",
  "Repository": "https://plambertuliege.r-universe.dev",
  "Date/Publication": "2025-04-04 07:40:51 UTC",
  "RemoteUrl": "https://github.com/plambertuliege/tvcure",
  "RemoteRef": "HEAD",
  "RemoteSha": "b34fd5b5a4228b864e384066eb98529e16eef061",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-05 09:01:29 UTC",
    "User": "root"
  },
  "Author": "Philippe Lambert [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-3670-3328>)",
  "_user": "plambertuliege",
  "_type": "src",
  "_file": "tvcure_0.6.6.tar.gz",
  "_fileid": "https://r2.ropensci.org/3cb27a0b9c38f73aa8044f56c937eaa07be419d2e076397edd5da08b6fe653c4",
  "_filesize": 667307,
  "_sha256": "3cb27a0b9c38f73aa8044f56c937eaa07be419d2e076397edd5da08b6fe653c4",
  "_expires": "2026-10-13T09:04:38.000Z",
  "_created": "2026-07-05T09:01:29.000Z",
  "_published": "2026-07-05T09:04:39.800Z",
  "_jobs": [
    {
      "job": 85209082999,
      "time": 135,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8090237193"
    },
    {
      "job": 85209082998,
      "time": 144,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8090238457"
    },
    {
      "job": 85209082997,
      "time": 112,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8090234002"
    },
    {
      "job": 85209083014,
      "time": 91,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8090231185"
    },
    {
      "job": 85208858388,
      "time": 185,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8090218169"
    },
    {
      "job": 85209082972,
      "time": 143,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8090237993"
    },
    {
      "job": 85209083003,
      "time": 83,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8090230220"
    },
    {
      "job": 85209083019,
      "time": 100,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8090232364"
    },
    {
      "job": 85209083011,
      "time": 96,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8090232001"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/plambertuliege/actions/runs/28735511231",
  "_status": "success",
  "_upstream": "https://github.com/plambertuliege/tvcure",
  "_commit": {
    "id": "b34fd5b5a4228b864e384066eb98529e16eef061",
    "author": "plambertULiege <p.lambert@uliege.be>",
    "committer": "plambertULiege <p.lambert@uliege.be>",
    "message": "Minor updates\n\nMinor updates to comply with CRAN rules and policies\n",
    "time": 1743752451
  },
  "_maintainer": {
    "name": "Philippe Lambert",
    "email": "p.lambert@uliege.be",
    "login": "plambertuliege",
    "orcid": "0000-0002-3670-3328",
    "description": "Professor at ULiege & UCLouvain\n",
    "uuid": 80159968
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "cubicBsplines",
      "role": "Imports"
    },
    {
      "package": "Rfast",
      "role": "Imports"
    },
    {
      "package": "MASS",
      "role": "Imports"
    },
    {
      "package": "Matrix",
      "role": "Imports"
    },
    {
      "package": "mgcv",
      "role": "Imports"
    }
  ],
  "_owner": "plambertuliege",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "plambertuliege",
      "count": 72,
      "uuid": 80159968
    }
  ],
  "_userbio": {
    "uuid": 80159968,
    "type": "user",
    "name": "Philippe Lambert",
    "followers": 5,
    "description": "Professor at ULiege & UCLouvain\r\n"
  },
  "_downloads": {
    "count": 545,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/tvcure"
  },
  "_devurl": "https://github.com/plambertuliege/tvcure",
  "_searchresults": 2,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "extra/tvcure.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/plambertuliege/tvcure",
  "_realowner": "plambertuliege",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.6.6",
      "date": "2025-04-07"
    }
  ],
  "_exports": [
    "additive.tvcure",
    "AIC.tvcure",
    "BIC.tvcure",
    "centeredBasis.gen",
    "DesignFormula",
    "deviance.tvcure",
    "EDF",
    "logEvid",
    "logEvid.tvcure",
    "Pcal.fun",
    "plot.tvcure",
    "plotRegion",
    "predict.tvcure",
    "print.tvcure",
    "qknots",
    "s",
    "show_c",
    "show_w",
    "simulateTVcureData",
    "simulateTVcureData2",
    "testStat",
    "tvcure"
  ],
  "_help": [
    {
      "page": "additive.tvcure",
      "title": "Extract additive term estimates from a tvcure object.",
      "topics": [
        "additive.tvcure"
      ]
    },
    {
      "page": "AIC.tvcure",
      "title": "Akaike Information Criterion (AIC) of a tvcure object.",
      "topics": [
        "AIC.tvcure"
      ]
    },
    {
      "page": "BIC.tvcure",
      "title": "Bayesian Information Criterion (BIC) of a 'tvcure.object'.",
      "topics": [
        "BIC.tvcure"
      ]
    },
    {
      "page": "centeredBasis.gen",
      "title": "Generation of a recentered cubic B-spline basis matrix.",
      "topics": [
        "centeredBasis.gen"
      ]
    },
    {
      "page": "deviance.tvcure",
      "title": "Deviance of a 'tvcure.object'.",
      "topics": [
        "deviance.tvcure"
      ]
    },
    {
      "page": "EDF",
      "title": "Compute the effective degrees freedom in a tvcure model",
      "topics": [
        "EDF"
      ]
    },
    {
      "page": "logEvid",
      "title": "Generic function for computing log-evidence",
      "topics": [
        "logEvid"
      ]
    },
    {
      "page": "logEvid.tvcure",
      "title": "Log-evidence of a tvcure object.",
      "topics": [
        "logEvid.tvcure"
      ]
    },
    {
      "page": "Pcal.fun",
      "title": "Function to generate a penalty matrix for additive terms.",
      "topics": [
        "Pcal.fun"
      ]
    },
    {
      "page": "plot.tvcure",
      "title": "Plot visual information related to a tvcure object.",
      "topics": [
        "plot.tvcure"
      ]
    },
    {
      "page": "plotRegion",
      "title": "Generic function to plot a shaded region around values of a scalar function.",
      "topics": [
        "plotRegion"
      ]
    },
    {
      "page": "predict.tvcure",
      "title": "Predict method for tvcure model fits",
      "topics": [
        "predict.tvcure"
      ]
    },
    {
      "page": "print.tvcure",
      "title": "Print summary information on a 'tvcure.object'.",
      "topics": [
        "print.tvcure"
      ]
    },
    {
      "page": "qknots",
      "title": "Specification of the knots of a cubic B-spline basis for given data.",
      "topics": [
        "qknots"
      ]
    },
    {
      "page": "show_c",
      "title": "Show Copyright Information",
      "topics": [
        "show_c"
      ]
    },
    {
      "page": "show_w",
      "title": "Show Warranty Disclaimer",
      "topics": [
        "show_w"
      ]
    },
    {
      "page": "simulateTVcureData",
      "title": "Simulation of survival data with a cure fraction and time-varying covariates.",
      "topics": [
        "simulateTVcureData"
      ]
    },
    {
      "page": "simulateTVcureData2",
      "title": "Simulation of survival data with a cure fraction and time-varying covariates.",
      "topics": [
        "simulateTVcureData2"
      ]
    },
    {
      "page": "tvcure",
      "title": "Fit of a tvcure model.",
      "topics": [
        "tvcure"
      ]
    },
    {
      "page": "tvcure.object",
      "title": "Object resulting from the fit of a tvcure model using function 'tvcure'.",
      "topics": [
        "tvcure.object"
      ]
    }
  ],
  "_readme": "https://github.com/plambertuliege/tvcure/raw/HEAD/README.md",
  "_rundeps": [
    "cubicBsplines",
    "lattice",
    "MASS",
    "Matrix",
    "mgcv",
    "nlme",
    "Rcpp",
    "RcppArmadillo",
    "RcppParallel",
    "Rfast",
    "zigg"
  ],
  "_score": 2.6989700043360187,
  "_indexed": true,
  "_nocasepkg": "tvcure",
  "_universes": [
    "plambertuliege"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.6.6",
      "date": "2026-07-05T09:03:35.000Z",
      "distro": "resolute",
      "commit": "b34fd5b5a4228b864e384066eb98529e16eef061",
      "fileid": "https://r2.ropensci.org/61c7825940d09756f7a9cf24ee88d3308a6d8fbc5c3d0e1f349b39116e2586a5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/plambertuliege/actions/runs/28735511231"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.6.6",
      "date": "2026-07-05T09:03:43.000Z",
      "distro": "resolute",
      "commit": "b34fd5b5a4228b864e384066eb98529e16eef061",
      "fileid": "https://r2.ropensci.org/405eef698b7eb673011fbbbcd472ccee738e9bba9c75c3796a0fadc0e4717616",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/plambertuliege/actions/runs/28735511231"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.6.6",
      "date": "2026-07-05T09:03:20.000Z",
      "commit": "b34fd5b5a4228b864e384066eb98529e16eef061",
      "fileid": "https://r2.ropensci.org/d9c7646256a2dbefe248b7de6311199ee69522b69aa9f417cf0b76a0e1d3ada1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/plambertuliege/actions/runs/28735511231"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.6.6",
      "date": "2026-07-05T09:03:01.000Z",
      "commit": "b34fd5b5a4228b864e384066eb98529e16eef061",
      "fileid": "https://r2.ropensci.org/ec4604687f0570182ad7c2193a630e51de75c4d2dec5e05a4dfe3fe5cd947c9a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/plambertuliege/actions/runs/28735511231"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.6.6",
      "date": "2026-07-05T09:04:13.000Z",
      "commit": "b34fd5b5a4228b864e384066eb98529e16eef061",
      "fileid": "https://r2.ropensci.org/1498b46798dee1c3411b669cea912d8a92446150b8124622f3a977b6655c3ac0",
      "status": "success",
      "buildurl": "https://github.com/r-universe/plambertuliege/actions/runs/28735511231"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.6.6",
      "date": "2026-07-05T09:02:39.000Z",
      "commit": "b34fd5b5a4228b864e384066eb98529e16eef061",
      "fileid": "https://r2.ropensci.org/1ed1efc7981091077877cd90f91fcdc651d3ba7280a645a178b1c57f58fef490",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/plambertuliege/actions/runs/28735511231"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.6.6",
      "date": "2026-07-05T09:02:53.000Z",
      "commit": "b34fd5b5a4228b864e384066eb98529e16eef061",
      "fileid": "https://r2.ropensci.org/9b0ef7a97a20d590997c30d5fe415025dc95e3ea285075b0eb8612a757f1d379",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/plambertuliege/actions/runs/28735511231"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.6.6",
      "date": "2026-07-05T09:02:53.000Z",
      "commit": "b34fd5b5a4228b864e384066eb98529e16eef061",
      "fileid": "https://r2.ropensci.org/c33c4fd1644cc65aae0f0a447487d9468229d38c706353a8205d05d499baf622",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/plambertuliege/actions/runs/28735511231"
    }
  ]
}